IL_5FCJ_341

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAA*UACC

Length

7 nucleotides

Bulged bases

5FCJ|1|5|A|2397, 5FCJ|1|5|C|2983

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5FCJ_341 not in the Motif Atlas

Homologous match to IL_8C3A_097

Geometric discrepancy: 0.3561

The information below is about IL_8C3A_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54678.7

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

5

Unit IDs

5FCJ|1|5|G|2396
5FCJ|1|5|A|2397
5FCJ|1|5|A|2398
*
5FCJ|1|5|U|2981
5FCJ|1|5|A|2982
5FCJ|1|5|C|2983
5FCJ|1|5|C|2984

Current chains

Chain 5

25S ribosomal RNA

Nearby chains

Chain l3

60S ribosomal protein L3

Chain m7

60S ribosomal protein L17-A