IL_5FCJ_426

3D structure

PDB id

5FCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCUAAC*GCGAAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5FCJ_426 not in the Motif Atlas

Homologous match to IL_8P9A_410

Geometric discrepancy: 0.1302

The information below is about IL_8P9A_410

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57885.2

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

5FCJ|1|6|G|703
5FCJ|1|6|C|704
5FCJ|1|6|U|705
5FCJ|1|6|A|706
5FCJ|1|6|A|707
5FCJ|1|6|C|708
*
5FCJ|1|6|G|730
5FCJ|1|6|C|731
5FCJ|1|6|G|732
5FCJ|1|6|A|733
5FCJ|1|6|A|734
5FCJ|1|6|C|735

Current chains

Chain 6

18S ribosomal RNA

Nearby chains