IL_5FCJ_439
3D structure
- PDB id
- 5FCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the anisomycin-containing uL3 W255C mutant 80S yeast ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5FCJ_439 not in the Motif Atlas
- Homologous match to IL_8P9A_423
- Geometric discrepancy: 0.0762
- The information below is about IL_8P9A_423
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31359.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
5FCJ|1|6|G|985
5FCJ|1|6|G|986
5FCJ|1|6|G|987
5FCJ|1|6|A|988
5FCJ|1|6|U|989
5FCJ|1|6|C|990
*
5FCJ|1|6|G|1014
5FCJ|1|6|U|1015
5FCJ|1|6|C|1016
Current chains
- Chain 6
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain c4
- 40S ribosomal protein S14-A
- Chain d6
- 40S ribosomal protein S26-B
- Chain l2
- 60S ribosomal protein L2-A
- Chain q3
- 60S ribosomal protein L43-A
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