IL_5FL8_038

3D structure

PDB id

5FL8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

UCCGUAAC*GGAUAAGGA

Length

17 nucleotides

Bulged bases

5FL8|1|x|U|1931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FL8|1|x|U|1916
5FL8|1|x|C|1917
5FL8|1|x|C|1918
5FL8|1|x|G|1919
5FL8|1|x|U|1920
5FL8|1|x|A|1921
5FL8|1|x|A|1922
5FL8|1|x|C|1923
*
5FL8|1|x|G|1928
5FL8|1|x|G|1929
5FL8|1|x|A|1930
5FL8|1|x|U|1931
5FL8|1|x|A|1932
5FL8|1|x|A|1933
5FL8|1|x|G|1934
5FL8|1|x|G|1935
5FL8|1|x|A|1936

Current chains

Chain x

25S ribosomal RNA

Nearby chains

Chain R

60S ribosomal protein L19-A

Chain p

60S ribosomal protein L43-A