IL_5FL8_042

3D structure

PDB id

5FL8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

GUGGACUGCUU*AGGCGGACUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FL8|1|x|G|1991
5FL8|1|x|U|1992
5FL8|1|x|G|1993
5FL8|1|x|G|1994
5FL8|1|x|A|1995
5FL8|1|x|C|1996
5FL8|1|x|U|1997
5FL8|1|x|G|1998
5FL8|1|x|C|1999
5FL8|1|x|U|2000
5FL8|1|x|U|2001
*
5FL8|1|x|A|2020
5FL8|1|x|G|2021
5FL8|1|x|G|2022
5FL8|1|x|C|2023
5FL8|1|x|G|2024
5FL8|1|x|G|2025
5FL8|1|x|A|2026
5FL8|1|x|C|2027
5FL8|1|x|U|2028
5FL8|1|x|A|2029
5FL8|1|x|C|2030

Current chains

Chain x

25S ribosomal RNA

Nearby chains

Chain u

ARX1