IL_5FL8_051

3D structure

PDB id

5FL8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE

Experimental method

ELECTRON MICROSCOPY

Resolution

9.5 Å

Loop

Sequence

CCAAAUGCCUCGUC*GACGCG

Length

20 nucleotides

Bulged bases

5FL8|1|x|A|2281, 5FL8|1|x|C|2287, 5FL8|1|x|C|2306

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5FL8|1|x|C|2277
5FL8|1|x|C|2278
5FL8|1|x|A|2279
5FL8|1|x|A|2280
5FL8|1|x|A|2281
5FL8|1|x|U|2282
5FL8|1|x|G|2283
5FL8|1|x|C|2284
5FL8|1|x|C|2285
5FL8|1|x|U|2286
5FL8|1|x|C|2287
5FL8|1|x|G|2288
5FL8|1|x|U|2289
5FL8|1|x|C|2290
*
5FL8|1|x|G|2302
5FL8|1|x|A|2303
5FL8|1|x|C|2304
5FL8|1|x|G|2305
5FL8|1|x|C|2306
5FL8|1|x|G|2307

Current chains

Chain x

25S ribosomal RNA

Nearby chains