IL_5FL8_063
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- CAGACAUGGUGUUUUGUGCCCUCUGCUCCUUGUGGGUAGGGGAAUCUCGCAUUUCACUGGGCCAGCAUCAGUUU*GGACUGAGGACUGCGACGUAAGUCAAGGAUGCUGGCAUAAUG
- Length
- 116 nucleotides
- Bulged bases
- 5FL8|1|x|C|439, 5FL8|1|x|A|440, 5FL8|1|x|U|441, 5FL8|1|x|U|465, 5FL8|1|x|A|478, 5FL8|1|x|C|480, 5FL8|1|x|U|481, 5FL8|1|x|C|482, 5FL8|1|x|U|486, 5FL8|1|x|U|492, 5FL8|1|x|G|494, 5FL8|1|x|A|607, 5FL8|1|x|A|619
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|C|435
5FL8|1|x|A|436
5FL8|1|x|G|437
5FL8|1|x|A|438
5FL8|1|x|C|439
5FL8|1|x|A|440
5FL8|1|x|U|441
5FL8|1|x|G|442
5FL8|1|x|G|443
5FL8|1|x|U|444
5FL8|1|x|G|445
5FL8|1|x|U|446
5FL8|1|x|U|447
5FL8|1|x|U|448
5FL8|1|x|U|449
5FL8|1|x|G|450
5FL8|1|x|U|451
5FL8|1|x|G|452
5FL8|1|x|C|453
5FL8|1|x|C|454
5FL8|1|x|C|455
5FL8|1|x|U|456
5FL8|1|x|C|457
5FL8|1|x|U|458
5FL8|1|x|G|459
5FL8|1|x|C|460
5FL8|1|x|U|461
5FL8|1|x|C|462
5FL8|1|x|C|463
5FL8|1|x|U|464
5FL8|1|x|U|465
5FL8|1|x|G|466
5FL8|1|x|U|467
5FL8|1|x|G|468
5FL8|1|x|G|469
5FL8|1|x|G|470
5FL8|1|x|U|471
5FL8|1|x|A|472
5FL8|1|x|G|473
5FL8|1|x|G|474
5FL8|1|x|G|475
5FL8|1|x|G|476
5FL8|1|x|A|477
5FL8|1|x|A|478
5FL8|1|x|U|479
5FL8|1|x|C|480
5FL8|1|x|U|481
5FL8|1|x|C|482
5FL8|1|x|G|483
5FL8|1|x|C|484
5FL8|1|x|A|485
5FL8|1|x|U|486
5FL8|1|x|U|487
5FL8|1|x|U|488
5FL8|1|x|C|489
5FL8|1|x|A|490
5FL8|1|x|C|491
5FL8|1|x|U|492
5FL8|1|x|G|493
5FL8|1|x|G|494
5FL8|1|x|G|495
5FL8|1|x|C|496
5FL8|1|x|C|497
5FL8|1|x|A|498
5FL8|1|x|G|499
5FL8|1|x|C|500
5FL8|1|x|A|501
5FL8|1|x|U|502
5FL8|1|x|C|503
5FL8|1|x|A|504
5FL8|1|x|G|505
5FL8|1|x|U|506
5FL8|1|x|U|507
5FL8|1|x|U|508
*
5FL8|1|x|G|583
5FL8|1|x|G|584
5FL8|1|x|A|585
5FL8|1|x|C|586
5FL8|1|x|U|587
5FL8|1|x|G|588
5FL8|1|x|A|589
5FL8|1|x|G|590
5FL8|1|x|G|591
5FL8|1|x|A|592
5FL8|1|x|C|593
5FL8|1|x|U|594
5FL8|1|x|G|595
5FL8|1|x|C|596
5FL8|1|x|G|597
5FL8|1|x|A|598
5FL8|1|x|C|599
5FL8|1|x|G|600
5FL8|1|x|U|601
5FL8|1|x|A|602
5FL8|1|x|A|603
5FL8|1|x|G|604
5FL8|1|x|U|605
5FL8|1|x|C|606
5FL8|1|x|A|607
5FL8|1|x|A|608
5FL8|1|x|G|609
5FL8|1|x|G|610
5FL8|1|x|A|611
5FL8|1|x|U|612
5FL8|1|x|G|613
5FL8|1|x|C|614
5FL8|1|x|U|615
5FL8|1|x|G|616
5FL8|1|x|G|617
5FL8|1|x|C|618
5FL8|1|x|A|619
5FL8|1|x|U|620
5FL8|1|x|A|621
5FL8|1|x|A|622
5FL8|1|x|U|623
5FL8|1|x|G|624
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain E
- 60S ribosomal protein L6-A
- Chain F
- 60S ribosomal protein L7-A
- Chain P
- 60S ribosomal protein L17-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
Coloring options: