IL_5FL8_068
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- GUGAACUAU*AUAGGGGCGAAAGACUAAUCGAAC
- Length
- 33 nucleotides
- Bulged bases
- 5FL8|1|x|A|817, 5FL8|1|x|A|913, 5FL8|1|x|A|915, 5FL8|1|x|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|G|813
5FL8|1|x|U|814
5FL8|1|x|G|815
5FL8|1|x|A|816
5FL8|1|x|A|817
5FL8|1|x|C|818
5FL8|1|x|U|819
5FL8|1|x|A|820
5FL8|1|x|U|821
*
5FL8|1|x|A|904
5FL8|1|x|U|905
5FL8|1|x|A|906
5FL8|1|x|G|907
5FL8|1|x|G|908
5FL8|1|x|G|909
5FL8|1|x|G|910
5FL8|1|x|C|911
5FL8|1|x|G|912
5FL8|1|x|A|913
5FL8|1|x|A|914
5FL8|1|x|A|915
5FL8|1|x|G|916
5FL8|1|x|A|917
5FL8|1|x|C|918
5FL8|1|x|U|919
5FL8|1|x|A|920
5FL8|1|x|A|921
5FL8|1|x|U|922
5FL8|1|x|C|923
5FL8|1|x|G|924
5FL8|1|x|A|925
5FL8|1|x|A|926
5FL8|1|x|C|927
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain C
- 60S ribosomal protein L4-A
- Chain N
- 60S ribosomal protein L15-A
- Chain j
- 60S ribosomal protein L37-A
- Chain y
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: