IL_5FL8_072
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- UAGAGUUAAGGUGCCGGAA*UACCUAUACUCUA
- Length
- 32 nucleotides
- Bulged bases
- 5FL8|1|x|U|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|U|1162
5FL8|1|x|A|1163
5FL8|1|x|G|1164
5FL8|1|x|A|1165
5FL8|1|x|G|1166
5FL8|1|x|U|1167
5FL8|1|x|U|1168
5FL8|1|x|A|1169
5FL8|1|x|A|1170
5FL8|1|x|G|1171
5FL8|1|x|G|1172
5FL8|1|x|U|1173
5FL8|1|x|G|1174
5FL8|1|x|C|1175
5FL8|1|x|C|1176
5FL8|1|x|G|1177
5FL8|1|x|G|1178
5FL8|1|x|A|1179
5FL8|1|x|A|1180
*
5FL8|1|x|U|1325
5FL8|1|x|A|1326
5FL8|1|x|C|1327
5FL8|1|x|C|1328
5FL8|1|x|U|1329
5FL8|1|x|A|1330
5FL8|1|x|U|1331
5FL8|1|x|A|1332
5FL8|1|x|C|1333
5FL8|1|x|U|1334
5FL8|1|x|C|1335
5FL8|1|x|U|1336
5FL8|1|x|A|1337
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4-A
- Chain F
- 60S ribosomal protein L7-A
- Chain O
- 60S ribosomal protein L16-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain S
- 60S ribosomal protein L20-A
- Chain e
- 60S ribosomal protein L32
- Chain f
- 60S ribosomal protein L33-A
- Chain z
- 5S ribosomal RNA; 5S rRNA
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