IL_5FL8_077
3D structure
- PDB id
- 5FL8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF THE RIX1-REA1 PRE-60S PARTICLE
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.5 Å
Loop
- Sequence
- AGAUGGGGAAGCUCCGUUUCAAAGGCC*GCCACCAU
- Length
- 35 nucleotides
- Bulged bases
- 5FL8|1|x|U|1554, 5FL8|1|x|U|1555, 5FL8|1|x|C|1556, 5FL8|1|x|A|1558
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5FL8|1|x|A|1537
5FL8|1|x|G|1538
5FL8|1|x|A|1539
5FL8|1|x|U|1540
5FL8|1|x|G|1541
5FL8|1|x|G|1542
5FL8|1|x|G|1543
5FL8|1|x|G|1544
5FL8|1|x|A|1545
5FL8|1|x|A|1546
5FL8|1|x|G|1547
5FL8|1|x|C|1548
5FL8|1|x|U|1549
5FL8|1|x|C|1550
5FL8|1|x|C|1551
5FL8|1|x|G|1552
5FL8|1|x|U|1553
5FL8|1|x|U|1554
5FL8|1|x|U|1555
5FL8|1|x|C|1556
5FL8|1|x|A|1557
5FL8|1|x|A|1558
5FL8|1|x|A|1559
5FL8|1|x|G|1560
5FL8|1|x|G|1561
5FL8|1|x|C|1562
5FL8|1|x|C|1563
*
5FL8|1|x|G|1577
5FL8|1|x|C|1578
5FL8|1|x|C|1579
5FL8|1|x|A|1580
5FL8|1|x|C|1581
5FL8|1|x|C|1582
5FL8|1|x|A|1583
5FL8|1|x|U|1584
Current chains
- Chain x
- 25S ribosomal RNA
Nearby chains
- Chain A
- 60S ribosomal protein L2-A
- Chain G
- 60S ribosomal protein L8-A
- Chain N
- 60S ribosomal protein L15-A
- Chain X
- 60S ribosomal protein L25
- Chain j
- 60S ribosomal protein L37-A
- Chain y
- 5.8S ribosomal RNA; 5.8S rRNA
Coloring options: