IL_5FQ5_002
3D structure
- PDB id
- 5FQ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Cas9-sgRNA-DNA complex solved by native SAD phasing
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.14 Å
Loop
- Sequence
- GC*GUC
- Length
- 5 nucleotides
- Bulged bases
- 5FQ5|1|A|U|59
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
5FQ5|1|A|G|54
5FQ5|1|A|C|55
*
5FQ5|1|A|G|58
5FQ5|1|A|U|59
5FQ5|1|A|C|60
Current chains
- Chain A
- SGRNA
Nearby chains
- Chain B
- CRISPR-ASSOCIATED ENDONUCLEASE CAS9/CSN1
Coloring options: