IL_5GAD_002

3D structure

PDB id

5GAD (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP-SR complex early state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

UACCAG*CAA

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_03003.1

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

2

Unit IDs

5GAD|1|1|U|38
5GAD|1|1|A|39
5GAD|1|1|C|40
5GAD|1|1|C|41
5GAD|1|1|A|42
5GAD|1|1|G|43
*
5GAD|1|1|C|66
5GAD|1|1|A|67
5GAD|1|1|A|68

Current chains

Chain 1

ESRP 4.5S RNA

Nearby chains

Chain T

50S ribosomal protein L22

Chain i

Signal recognition particle protein Ffh