IL_5GAD_125

3D structure

PDB id

5GAD (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP-SR complex early state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GCAAGGG*UACCAACC

Length

15 nucleotides

Bulged bases

5GAD|1|A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5GAD|1|A|G|875
5GAD|1|A|C|876
5GAD|1|A|A|877
5GAD|1|A|A|878
5GAD|1|A|G|879
5GAD|1|A|G|880
5GAD|1|A|G|881
*
5GAD|1|A|U|895
5GAD|1|A|A|896
5GAD|1|A|C|897
5GAD|1|A|C|898
5GAD|1|A|A|899
5GAD|1|A|A|900
5GAD|1|A|C|901
5GAD|1|A|C|902

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L16