IL_5GAG_124

3D structure

PDB id

5GAG (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC in complex with SRP-SR in the closed state

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GCAAGGG*UACCAACC

Length

15 nucleotides

Bulged bases

5GAG|1|A|A|896

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5GAG|1|A|G|875
5GAG|1|A|C|876
5GAG|1|A|A|877
5GAG|1|A|A|878
5GAG|1|A|G|879
5GAG|1|A|G|880
5GAG|1|A|G|881
*
5GAG|1|A|U|895
5GAG|1|A|A|896
5GAG|1|A|C|897
5GAG|1|A|C|898
5GAG|1|A|A|899
5GAG|1|A|A|900
5GAG|1|A|C|901
5GAG|1|A|C|902

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L16