IL_5H4P_047

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

GACG*CGCUAAGGAGUGUGUAACAACUCAC

Length

29 nucleotides

Bulged bases

5H4P|1|1|A|1263

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|G|1230
5H4P|1|1|A|1231
5H4P|1|1|C|1232
5H4P|1|1|G|1233
*
5H4P|1|1|C|1255
5H4P|1|1|G|1256
5H4P|1|1|C|1257
5H4P|1|1|U|1258
5H4P|1|1|A|1259
5H4P|1|1|A|1260
5H4P|1|1|G|1261
5H4P|1|1|G|1262
5H4P|1|1|A|1263
5H4P|1|1|G|1264
5H4P|1|1|U|1265
5H4P|1|1|G|1266
5H4P|1|1|U|1267
5H4P|1|1|G|1268
5H4P|1|1|U|1269
5H4P|1|1|A|1270
5H4P|1|1|A|1271
5H4P|1|1|C|1272
5H4P|1|1|A|1273
5H4P|1|1|A|1274
5H4P|1|1|C|1275
5H4P|1|1|U|1276
5H4P|1|1|C|1277
5H4P|1|1|A|1278
5H4P|1|1|C|1279

Current chains

Chain 1

25S ribosomal RNA

Nearby chains