IL_5H4P_057
3D structure
- PDB id
- 5H4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.07 Å
Loop
- Sequence
- GGAUUCUUC*GGAAUAGUUUUC
- Length
- 21 nucleotides
- Bulged bases
- 5H4P|1|1|U|1629, 5H4P|1|1|U|1820, 5H4P|1|1|U|1821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5H4P|1|1|G|1623
5H4P|1|1|G|1624
5H4P|1|1|A|1625
5H4P|1|1|U|1626
5H4P|1|1|U|1627
5H4P|1|1|C|1628
5H4P|1|1|U|1629
5H4P|1|1|U|1630
5H4P|1|1|C|1631
*
5H4P|1|1|G|1811
5H4P|1|1|G|1812
5H4P|1|1|A|1813
5H4P|1|1|A|1814
5H4P|1|1|U|1815
5H4P|1|1|A|1816
5H4P|1|1|G|1817
5H4P|1|1|U|1818
5H4P|1|1|U|1819
5H4P|1|1|U|1820
5H4P|1|1|U|1821
5H4P|1|1|C|1822
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain Z
- 60S ribosomal protein L27-A
- Chain g
- 60S ribosomal protein L34-A
- Chain k
- 60S ribosomal protein L38
Coloring options: