IL_5H4P_062

3D structure

PDB id

5H4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural snapshot of cytoplasmic pre-60S ribosomal particles bound with Nmd3, Lsg1, Tif6 and Reh1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.07 Å

Loop

Sequence

CUUAUCA*UCUUAUGG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H4P|1|1|C|1701
5H4P|1|1|U|1702
5H4P|1|1|U|1703
5H4P|1|1|A|1704
5H4P|1|1|U|1705
5H4P|1|1|C|1706
5H4P|1|1|A|1707
*
5H4P|1|1|U|1737
5H4P|1|1|C|1738
5H4P|1|1|U|1739
5H4P|1|1|U|1740
5H4P|1|1|A|1741
5H4P|1|1|U|1742
5H4P|1|1|G|1743
5H4P|1|1|G|1744

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain g

60S ribosomal protein L34-A