IL_5H5U_041

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

5H5U|1|A|U|1061, 5H5U|1|A|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|A|G|1059
5H5U|1|A|U|1060
5H5U|1|A|U|1061
5H5U|1|A|G|1062
*
5H5U|1|A|C|1076
5H5U|1|A|A|1077
5H5U|1|A|U|1078
5H5U|1|A|C|1079

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L10

Chain J

50S ribosomal protein L11

Chain N

50S ribosomal protein L16