IL_5H5U_086

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

CUUUGAAGUG*CAUGGAG

Length

17 nucleotides

Bulged bases

5H5U|1|A|U|2131, 5H5U|1|A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|A|C|2129
5H5U|1|A|U|2130
5H5U|1|A|U|2131
5H5U|1|A|U|2132
5H5U|1|A|G|2133
5H5U|1|A|A|2134
5H5U|1|A|A|2135
5H5U|1|A|G|2136
5H5U|1|A|U|2137
5H5U|1|A|G|2138
*
5H5U|1|A|C|2153
5H5U|1|A|A|2154
5H5U|1|A|U|2155
5H5U|1|A|G|2156
5H5U|1|A|G|2157
5H5U|1|A|A|2158
5H5U|1|A|G|2159

Current chains

Chain A

23S rRNA

Nearby chains