IL_5H5U_187

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

GGCAAG*CAACCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|A|G|874
5H5U|1|A|G|875
5H5U|1|A|C|876
5H5U|1|A|A|877
5H5U|1|A|A|878
5H5U|1|A|G|879
*
5H5U|1|A|C|898
5H5U|1|A|A|899
5H5U|1|A|A|900
5H5U|1|A|C|901
5H5U|1|A|C|902
5H5U|1|A|C|903

Current chains

Chain A

23S rRNA

Nearby chains

Chain N

50S ribosomal protein L16