IL_5H5U_193

3D structure

PDB id

5H5U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mechanistic insights into the alternative translation termination by ArfA and RF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.01 Å

Loop

Sequence

AGCCUUGAUG*CUUUAAUGUU

Length

20 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5H5U|1|A|A|2101
5H5U|1|A|G|2102
5H5U|1|A|C|2103
5H5U|1|A|C|2104
5H5U|1|A|U|2105
5H5U|1|A|U|2106
5H5U|1|A|G|2107
5H5U|1|A|A|2108
5H5U|1|A|U|2109
5H5U|1|A|G|2110
*
5H5U|1|A|C|2179
5H5U|1|A|U|2180
5H5U|1|A|U|2181
5H5U|1|A|U|2182
5H5U|1|A|A|2183
5H5U|1|A|A|2184
5H5U|1|A|U|2185
5H5U|1|A|G|2186
5H5U|1|A|U|2187
5H5U|1|A|U|2188

Current chains

Chain A

23S rRNA

Nearby chains