IL_5HAU_001
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_001 not in the Motif Atlas
- Homologous match to IL_7RQB_001
- Geometric discrepancy: 0.0412
- The information below is about IL_7RQB_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_66414.6
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
5HAU|1|1A|G|23
5HAU|1|1A|U|24
5HAU|1|1A|G|25
5HAU|1|1A|G|26
5HAU|1|1A|A|27
5HAU|1|1A|U|28
5HAU|1|1A|G|29
*
5HAU|1|1A|C|534
5HAU|1|1A|U|535
5HAU|1|1A|G|536
5HAU|1|1A|A|537
5HAU|1|1A|A|538
5HAU|1|1A|A|539
5HAU|1|1A|C|540
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 13
- 50S ribosomal protein L32
- Chain 1S
- 50S ribosomal protein L20
- Chain 1U
- 50S ribosomal protein L22
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