IL_5HAU_044
3D structure
- PDB id
- 5HAU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGU*AGUG
- Length
- 7 nucleotides
- Bulged bases
- 5HAU|1|1A|G|1293
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5HAU_044 not in the Motif Atlas
- Homologous match to IL_7RQB_045
- Geometric discrepancy: 0.0599
- The information below is about IL_7RQB_045
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.4
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
5HAU|1|1A|C|1240
5HAU|1|1A|G|1241
5HAU|1|1A|U|1242
*
5HAU|1|1A|A|1292
5HAU|1|1A|G|1293
5HAU|1|1A|U|1294
5HAU|1|1A|G|1295
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1F
- 50S ribosomal protein L4
- Chain 1N
- 50S ribosomal protein L15
- Chain 1S
- 50S ribosomal protein L20
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