IL_5HAU_088

3D structure

PDB id

5HAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCCG*UGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5HAU|1|1A|C|2159
5HAU|1|1A|C|2160
5HAU|1|1A|C|2161
5HAU|1|1A|G|2162
*
5HAU|1|1A|U|2171
5HAU|1|1A|G|2172
5HAU|1|1A|G|2173
5HAU|1|1A|G|2174

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1C

50S ribosomal protein L1