IL_5HAU_359

3D structure

PDB id

5HAU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

5HAU|1|1A|A|1091, 5HAU|1|1A|U|1153

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5HAU|1|1A|C|1088
5HAU|1|1A|G|1089
5HAU|1|1A|A|1090
5HAU|1|1A|A|1091
5HAU|1|1A|G|1092
5HAU|1|1A|A|1093
5HAU|1|1A|C|1094
5HAU|1|1A|A|1095
5HAU|1|1A|G|1096
5HAU|1|1A|C|1097
5HAU|1|1A|C|1098
*
5HAU|1|1A|G|1151
5HAU|1|1A|G|1152
5HAU|1|1A|U|1153
5HAU|1|1A|C|1154
5HAU|1|1A|G|1155
5HAU|1|1A|A|1156
5HAU|1|1A|G|1157

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1H

50S ribosomal protein L6

Chain 1J

50S ribosomal protein L10