IL_5HL7_034
3D structure
- PDB id
- 5HL7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GGAAAG*CGAAAAUGUACCGGGGC*C
- Length
- 24 nucleotides
- Bulged bases
- 5HL7|1|X|A|1171, 5HL7|1|X|U|1174, 5HL7|1|X|C|1178
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5HL7|1|X|G|1068
5HL7|1|X|G|1069
5HL7|1|X|A|1071
5HL7|1|X|A|1072
5HL7|1|X|A|1073
5HL7|1|X|G|1074
*
5HL7|1|X|C|1168
5HL7|1|X|G|1169
5HL7|1|X|A|1170
5HL7|1|X|A|1171
5HL7|1|X|A|1172
5HL7|1|X|A|1173
5HL7|1|X|U|1174
5HL7|1|X|G|1175
5HL7|1|X|U|1176
5HL7|1|X|A|1177
5HL7|1|X|C|1178
5HL7|1|X|C|1179
5HL7|1|X|G|1180
5HL7|1|X|G|1181
5HL7|1|X|G|1182
5HL7|1|X|G|1183
5HL7|1|X|C|1184
*
5HL7|1|X|C|1184
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L36
- Chain B
- 50S ribosomal protein L3
- Chain G
- 50S ribosomal protein L13
- Chain J
- 50S ribosomal protein L16
- Chain Y
- 5S ribosomal RNA; 5S rRNA
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