Loop IL_5HL7

3D structure

PDB id: 5HL7 (explore in PDB, NAKB, or RNA 3D Hub)
Description: The crystal structure of the large ribosomal subunit of Staphylococcus aureus in complex with lefamulin
Experimental method: X-RAY DIFFRACTION
Resolution: 3.55 Å

Loop

Sequence: GCGAAGCGUGCGAUUGGAUUGCACGUCUAAGC*GUGAUGGGGAGAAGAGAGUCGUU
Length: 55 nucleotides
Bulged bases: 5HL7|1|X|U|1498, 5HL7|1|X|G|1569, 5HL7|1|X|G|1591
QA status: Missing nucleotides

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

5HL7|1|X|G|1485
5HL7|1|X|C|1486
5HL7|1|X|G|1487
5HL7|1|X|A|1488
5HL7|1|X|A|1489
5HL7|1|X|G|1490
5HL7|1|X|C|1491
5HL7|1|X|G|1492
5HL7|1|X|U|1493
5HL7|1|X|G|1494
5HL7|1|X|C|1495
5HL7|1|X|G|1496
5HL7|1|X|A|1497
5HL7|1|X|U|1498
5HL7|1|X|U|1499
5HL7|1|X|G|1500
5HL7|1|X|G|1501
5HL7|1|X|A|1502
5HL7|1|X|U|1503
5HL7|1|X|U|1504
5HL7|1|X|G|1505
5HL7|1|X|C|1506
5HL7|1|X|A|1507
5HL7|1|X|C|1508
5HL7|1|X|G|1509
5HL7|1|X|U|1510
5HL7|1|X|C|1511
5HL7|1|X|U|1512
5HL7|1|X|A|1513
5HL7|1|X|A|1514
5HL7|1|X|G|1515
5HL7|1|X|C|1516
*
5HL7|1|X|G|1564
5HL7|1|X|U|1565
5HL7|1|X|G|1566
5HL7|1|X|A|1567
5HL7|1|X|U|1568
5HL7|1|X|G|1569
5HL7|1|X|G|1570
5HL7|1|X|G|1571
5HL7|1|X|G|1572
5HL7|1|X|A|1573
5HL7|1|X|G|1574
5HL7|1|X|A|1575
5HL7|1|X|A|1576
5HL7|1|X|G|1577
5HL7|1|X|A|1578
5HL7|1|X|G|1591
5HL7|1|X|A|1592
5HL7|1|X|G|1593
5HL7|1|X|U|1594
5HL7|1|X|C|1595
5HL7|1|X|G|1596
5HL7|1|X|U|1597
5HL7|1|X|U|1598

Current chains

Chain X: 23S ribosomal RNA

Nearby chains

Chain K: 50S ribosomal protein L17

IL_5HL7_050