IL_5I4L_498
3D structure
- PDB id
- 5I4L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of Amicoumacin A bound to the yeast 80S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGGG*UCUUUGUA
- Length
- 12 nucleotides
- Bulged bases
- 5I4L|1|5|U|252
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5I4L|1|5|U|169
5I4L|1|5|G|170
5I4L|1|5|G|171
5I4L|1|5|G|172
*
5I4L|1|5|U|246
5I4L|1|5|C|247
5I4L|1|5|U|248
5I4L|1|5|U|249
5I4L|1|5|U|250
5I4L|1|5|G|251
5I4L|1|5|U|252
5I4L|1|5|A|253
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain M3
- 60S ribosomal protein L13-A
- Chain l8
- 60S ribosomal protein L8-A
- Chain m3
- 60S ribosomal protein L13-A
- Chain o5
- 60S ribosomal protein L35-A
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