IL_5IB7_143

3D structure

PDB id

5IB7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.99 Å

Loop

Sequence

GCCUGUGAACC*GGGAGGC

Length

18 nucleotides

Bulged bases

5IB7|1|14|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IB7|1|14|G|2127
5IB7|1|14|C|2128
5IB7|1|14|C|2129
5IB7|1|14|U|2130
5IB7|1|14|G|2131
5IB7|1|14|U|2132
5IB7|1|14|G|2133
5IB7|1|14|A|2134
5IB7|1|14|A|2135
5IB7|1|14|C|2136
5IB7|1|14|C|2137
*
5IB7|1|14|G|2155
5IB7|1|14|G|2156
5IB7|1|14|G|2157
5IB7|1|14|A|2158
5IB7|1|14|G|2159
5IB7|1|14|G|2160
5IB7|1|14|C|2161

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 13

Small subunit ribosomal RNA; SSU rRNA