IL_5IB8_347

3D structure

PDB id

5IB8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.13 Å

Loop

Sequence

CGGACACCGAAU*AUAGGUG

Length

19 nucleotides

Bulged bases

5IB8|1|14|C|277, 5IB8|1|14|A|283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IB8|1|14|C|273|||F
5IB8|1|14|G|274
5IB8|1|14|G|275
5IB8|1|14|A|276
5IB8|1|14|C|277
5IB8|1|14|A|278
5IB8|1|14|C|279
5IB8|1|14|C|280
5IB8|1|14|G|281
5IB8|1|14|A|282
5IB8|1|14|A|283
5IB8|1|14|U|284
*
5IB8|1|14|A|357
5IB8|1|14|U|358
5IB8|1|14|A|359
5IB8|1|14|G|360
5IB8|1|14|G|361
5IB8|1|14|U|362
5IB8|1|14|G|363

Current chains

Chain 14

23S ribosomal RNA

Nearby chains