IL_5IBB_009
3D structure
- PDB id
- 5IBB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.96 Å
Loop
- Sequence
- CUACC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5IBB_009 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.1184
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
5IBB|1|13|C|132
5IBB|1|13|U|133
5IBB|1|13|A|134
5IBB|1|13|C|135
5IBB|1|13|C|136
*
5IBB|1|13|G|227
5IBB|1|13|A|228
5IBB|1|13|U|229
5IBB|1|13|G|230
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain 7I
- 30S ribosomal protein S16
- Chain BI
- 30S ribosomal protein S20
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