IL_5IBB_139

3D structure

PDB id

5IBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

2.96 Å

Loop

Sequence

GCCUG*CUGGC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IBB|1|14|G|2106
5IBB|1|14|C|2107
5IBB|1|14|C|2108
5IBB|1|14|U|2109
5IBB|1|14|G|2110
*
5IBB|1|14|C|2179
5IBB|1|14|U|2180
5IBB|1|14|G|2181
5IBB|1|14|G|2182
5IBB|1|14|C|2183

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 79

50S ribosomal protein L1