IL_5IMQ_118

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

CCUGUGAACC*GGGGAGG

Length

17 nucleotides

Bulged bases

5IMQ|1|D|G|2131

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|C|2128
5IMQ|1|D|C|2129
5IMQ|1|D|U|2130
5IMQ|1|D|G|2131
5IMQ|1|D|U|2132
5IMQ|1|D|G|2133
5IMQ|1|D|A|2134
5IMQ|1|D|A|2135
5IMQ|1|D|C|2136
5IMQ|1|D|C|2137
*
5IMQ|1|D|G|2154
5IMQ|1|D|G|2155
5IMQ|1|D|G|2156
5IMQ|1|D|G|2157
5IMQ|1|D|A|2158
5IMQ|1|D|G|2159
5IMQ|1|D|G|2160

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L1