IL_5IMQ_150

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGAAGAAGCC*GGUGUAAAC

Length

19 nucleotides

Bulged bases

5IMQ|1|A|A|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|A|G|409
5IMQ|1|A|G|410
5IMQ|1|A|A|411
5IMQ|1|A|A|412
5IMQ|1|A|G|413
5IMQ|1|A|A|414
5IMQ|1|A|A|415
5IMQ|1|A|G|416
5IMQ|1|A|C|417
5IMQ|1|A|C|418
*
5IMQ|1|A|G|425
5IMQ|1|A|G|426
5IMQ|1|A|U|427
5IMQ|1|A|G|428
5IMQ|1|A|U|429
5IMQ|1|A|A|430
5IMQ|1|A|A|431
5IMQ|1|A|A|432
5IMQ|1|A|C|433

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain H

30S ribosomal protein S4