IL_5IMQ_169

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGUGCGAUG*UCUAAGCACAACC

Length

22 nucleotides

Bulged bases

5IMQ|1|D|C|1585

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|G|1413
5IMQ|1|D|G|1414
5IMQ|1|D|U|1415
5IMQ|1|D|G|1416
5IMQ|1|D|C|1417
5IMQ|1|D|G|1418
5IMQ|1|D|A|1419
5IMQ|1|D|U|1420
5IMQ|1|D|G|1421
*
5IMQ|1|D|U|1576
5IMQ|1|D|C|1577
5IMQ|1|D|U|1578
5IMQ|1|D|A|1579
5IMQ|1|D|A|1580
5IMQ|1|D|G|1581
5IMQ|1|D|C|1582
5IMQ|1|D|A|1583
5IMQ|1|D|C|1585
5IMQ|1|D|A|1586
5IMQ|1|D|A|1587
5IMQ|1|D|C|1588
5IMQ|1|D|C|1589

Current chains

Chain D

23S ribosomal RNA

Nearby chains