IL_5IMQ_170

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGGACGC*GCCAAGAAAAGC

Length

20 nucleotides

Bulged bases

5IMQ|1|D|A|1566, 5IMQ|1|D|A|1567

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|G|1423
5IMQ|1|D|G|1424
5IMQ|1|D|G|1425
5IMQ|1|D|G|1426
5IMQ|1|D|A|1427
5IMQ|1|D|C|1428
5IMQ|1|D|G|1429
5IMQ|1|D|C|1430
*
5IMQ|1|D|G|1563
5IMQ|1|D|C|1564
5IMQ|1|D|C|1565
5IMQ|1|D|A|1566
5IMQ|1|D|A|1567
5IMQ|1|D|G|1568
5IMQ|1|D|A|1569
5IMQ|1|D|A|1570
5IMQ|1|D|A|1571
5IMQ|1|D|A|1572
5IMQ|1|D|G|1573
5IMQ|1|D|C|1574

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L2