IL_5IMQ_202

3D structure

PDB id

5IMQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of ribosome bound to cofactor at 3.8 angstrom resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

GGGAAGC*GUGACAAC

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IMQ|1|D|G|1525
5IMQ|1|D|G|1526
5IMQ|1|D|G|1527
5IMQ|1|D|A|1528
5IMQ|1|D|A|1529
5IMQ|1|D|G|1530
5IMQ|1|D|C|1531
*
5IMQ|1|D|G|1540
5IMQ|1|D|U|1541
5IMQ|1|D|G|1542
5IMQ|1|D|A|1543
5IMQ|1|D|C|1544
5IMQ|1|D|A|1545
5IMQ|1|D|A|1545|||A
5IMQ|1|D|C|1546

Current chains

Chain D

23S ribosomal RNA

Nearby chains

Chain j

50S ribosomal protein L17