IL_5IMQ_208
3D structure
- PDB id
- 5IMQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of ribosome bound to cofactor at 3.8 angstrom resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.8 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 5IMQ|1|D|G|2777, 5IMQ|1|D|U|2779, 5IMQ|1|D|G|2780
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5IMQ|1|D|U|2636
5IMQ|1|D|U|2637
5IMQ|1|D|G|2638
5IMQ|1|D|A|2639
5IMQ|1|D|G|2640
*
5IMQ|1|D|C|2774
5IMQ|1|D|A|2775
5IMQ|1|D|A|2776
5IMQ|1|D|G|2777
5IMQ|1|D|A|2778
5IMQ|1|D|U|2779
5IMQ|1|D|G|2780
5IMQ|1|D|A|2781
5IMQ|1|D|G|2782
Current chains
- Chain D
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain f
- 50S ribosomal protein L13
Coloring options: