IL_5IQR_144

3D structure

PDB id

5IQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CCG(PSU)GCCAG*CGGUAAUACGG

Length

20 nucleotides

Bulged bases

5IQR|1|2|A|532, 5IQR|1|2|U|534

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IQR|1|2|C|513
5IQR|1|2|C|514
5IQR|1|2|G|515
5IQR|1|2|PSU|516
5IQR|1|2|G|517
5IQR|1|2|C|518
5IQR|1|2|C|519
5IQR|1|2|A|520
5IQR|1|2|G|521
*
5IQR|1|2|C|528
5IQR|1|2|G|529
5IQR|1|2|G|530
5IQR|1|2|U|531
5IQR|1|2|A|532
5IQR|1|2|A|533
5IQR|1|2|U|534
5IQR|1|2|A|535
5IQR|1|2|C|536
5IQR|1|2|G|537
5IQR|1|2|G|538

Current chains

Chain 2

SSU rRNA

Nearby chains

Chain 6

Transfer RNA; tRNA

Chain 7

mRNA

Chain h

30S ribosomal protein S3

Chain i

30S ribosomal protein S4

Chain q

30S ribosomal protein S12