IL_5IQR_164

3D structure

PDB id

5IQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelA bound to the 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GAAG*UGUGCCUUCGGGAAC

Length

19 nucleotides

Bulged bases

5IQR|1|2|U|1025, 5IQR|1|2|U|1030, 5IQR|1|2|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5IQR|1|2|G|1003
5IQR|1|2|A|1004
5IQR|1|2|A|1005
5IQR|1|2|G|1006
*
5IQR|1|2|U|1023
5IQR|1|2|G|1024
5IQR|1|2|U|1025
5IQR|1|2|G|1026
5IQR|1|2|C|1027
5IQR|1|2|C|1028
5IQR|1|2|U|1029
5IQR|1|2|U|1030
5IQR|1|2|C|1031
5IQR|1|2|G|1032
5IQR|1|2|G|1033
5IQR|1|2|G|1034
5IQR|1|2|A|1035
5IQR|1|2|A|1036
5IQR|1|2|C|1037

Current chains

Chain 2

SSU rRNA

Nearby chains

Chain s

30S ribosomal protein S14