IL_5J3C_101

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

CGAAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

5J3C|1|RA|A|1045, 5J3C|1|RA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J3C|1|RA|C|1043
5J3C|1|RA|G|1044
5J3C|1|RA|A|1045
5J3C|1|RA|A|1046
5J3C|1|RA|G|1047
5J3C|1|RA|A|1048
5J3C|1|RA|C|1049
5J3C|1|RA|A|1050
5J3C|1|RA|G|1051
*
5J3C|1|RA|U|1108
5J3C|1|RA|C|1109
5J3C|1|RA|G|1110
5J3C|1|RA|A|1111
5J3C|1|RA|G|1112

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RH

50S ribosomal protein L6