IL_5J3C_114

3D structure

PDB id

5J3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S termination complex containing E. coli RF1

Experimental method

X-RAY DIFFRACTION

Resolution

3.04 Å

Loop

Sequence

UAG*CAGG

Length

7 nucleotides

Bulged bases

5J3C|1|RA|G|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5J3C_114 not in the Motif Atlas

Homologous match to IL_7RQB_056

Geometric discrepancy: 0.0631

The information below is about IL_7RQB_056

Detailed Annotation

Isolated tWW turn

Broad Annotation

No text annotation

Motif group

IL_54997.7

Basepair signature

cWW-tWW-cWW

Number of instances in this motif group

8

Unit IDs

5J3C|1|RA|U|1433
5J3C|1|RA|A|1434
5J3C|1|RA|G|1435
*
5J3C|1|RA|C|1557
5J3C|1|RA|A|1558
5J3C|1|RA|G|1559
5J3C|1|RA|G|1560

Current chains

Chain RA

23S rRNA

Nearby chains