IL_5J3C_139
3D structure
- PDB id
- 5J3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Thermus thermophilus 70S termination complex containing E. coli RF1
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.04 Å
Loop
- Sequence
- GA*UACC
- Length
- 6 nucleotides
- Bulged bases
- 5J3C|1|RA|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5J3C_139 not in the Motif Atlas
- Homologous match to IL_5J7L_324
- Geometric discrepancy: 0.059
- The information below is about IL_5J7L_324
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
5J3C|1|RA|G|2070
5J3C|1|RA|A|2071
*
5J3C|1|RA|U|2438
5J3C|1|RA|A|2439
5J3C|1|RA|C|2440
5J3C|1|RA|C|2441
Current chains
- Chain RA
- 23S rRNA
Nearby chains
- Chain QV
- Transfer RNA; tRNA
- Chain QY
- Peptide chain release factor 1
- Chain RD
- 50S ribosomal protein L2
Coloring options: