IL_5J4D_149

3D structure

PDB id

5J4D (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codon

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUGUGAACCCC*GGGGGGAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J4D|1|B|C|2129
5J4D|1|B|U|2130
5J4D|1|B|G|2131
5J4D|1|B|U|2132
5J4D|1|B|G|2133
5J4D|1|B|A|2134
5J4D|1|B|A|2135
5J4D|1|B|C|2136
5J4D|1|B|C|2137
5J4D|1|B|C|2138
5J4D|1|B|C|2139
*
5J4D|1|B|G|2152
5J4D|1|B|G|2153
5J4D|1|B|G|2154
5J4D|1|B|G|2155
5J4D|1|B|G|2156
5J4D|1|B|G|2157
5J4D|1|B|A|2158
5J4D|1|B|G|2159

Current chains

Chain B

25S ribosomal RNA

Nearby chains