IL_5J5B_217

3D structure

PDB id

5J5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the WT E coli ribosome bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

5J5B|1|CA|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5J5B|1|CA|G|2123
5J5B|1|CA|G|2124
5J5B|1|CA|G|2125
5J5B|1|CA|A|2126
5J5B|1|CA|G|2127
*
5J5B|1|CA|C|2161
5J5B|1|CA|G|2162
5J5B|1|CA|A|2163
5J5B|1|CA|C|2164
5J5B|1|CA|C|2165
5J5B|1|CA|U|2166
5J5B|1|CA|U|2167
5J5B|1|CA|G|2168
5J5B|1|CA|A|2169
5J5B|1|CA|A|2170
5J5B|1|CA|A|2171
5J5B|1|CA|U|2172
5J5B|1|CA|A|2173
5J5B|1|CA|C|2174
5J5B|1|CA|C|2175

Current chains

Chain CA

23S rRNA

Nearby chains