IL_5J7L_012

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

5J7L|1|AA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

5J7L|1|AA|G|147
5J7L|1|AA|G|148
5J7L|1|AA|A|149
5J7L|1|AA|U|150
5J7L|1|AA|A|151
5J7L|1|AA|A|152
5J7L|1|AA|C|153
*
5J7L|1|AA|G|168
5J7L|1|AA|C|169
5J7L|1|AA|U|170
5J7L|1|AA|A|171
5J7L|1|AA|A|172
5J7L|1|AA|U|173
5J7L|1|AA|A|174
5J7L|1|AA|C|175

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AT

30S ribosomal protein S20