IL_5J7L_129

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UAAC*GAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5J7L_129 not in the Motif Atlas

Homologous match to IL_5J7L_065

Geometric discrepancy: 0.0184

The information below is about IL_5J7L_065

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_31531.3

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

13

Unit IDs

5J7L|1|BA|U|1445
5J7L|1|BA|A|1446
5J7L|1|BA|A|1447
5J7L|1|BA|C|1448
*
5J7L|1|BA|G|1455
5J7L|1|BA|A|1456
5J7L|1|BA|G|1457

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BT

30S ribosomal protein S20