IL_5J7L_159

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCAAG*CAACC

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_5J7L_159 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.0269

The information below is about IL_5J7L_274

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

5J7L|1|CA|G|875
5J7L|1|CA|C|876
5J7L|1|CA|A|877
5J7L|1|CA|A|878
5J7L|1|CA|G|879
*
5J7L|1|CA|C|898
5J7L|1|CA|A|899
5J7L|1|CA|A|900
5J7L|1|CA|C|901
5J7L|1|CA|C|902

Current chains

Chain CA

23S rRNA

Nearby chains

Chain CN

50S ribosomal protein L16