IL_5J7L_265

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGG*CAAUC

Length

8 nucleotides

Bulged bases

5J7L|1|DA|G|776, 5J7L|1|DA|A|788, 5J7L|1|DA|A|789, 5J7L|1|DA|U|790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_06549.2

Basepair signature

cWW-cWW

Number of instances in this motif group

6

Unit IDs

5J7L|1|DA|G|775
5J7L|1|DA|G|776
5J7L|1|DA|G|777
*
5J7L|1|DA|C|787
5J7L|1|DA|A|788
5J7L|1|DA|A|789
5J7L|1|DA|U|790
5J7L|1|DA|C|791

Current chains

Chain DA

23S rRNA

Nearby chains

Chain D3

50S ribosomal protein L34

Chain DC

50S ribosomal protein L2

Chain DE

50S ribosomal protein L4

Chain DT

50S ribosomal protein L22