IL_5J7L_288

3D structure

PDB id

5J7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGCGAAG*UGGAG

Length

13 nucleotides

Bulged bases

5J7L|1|DA|C|1211

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_70923.9

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

27

Unit IDs

5J7L|1|DA|C|1208
5J7L|1|DA|U|1209
5J7L|1|DA|G|1210
5J7L|1|DA|C|1211
5J7L|1|DA|G|1212
5J7L|1|DA|A|1213
5J7L|1|DA|A|1214
5J7L|1|DA|G|1215
*
5J7L|1|DA|U|1234
5J7L|1|DA|G|1235
5J7L|1|DA|G|1236
5J7L|1|DA|A|1237
5J7L|1|DA|G|1238

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DR

50S ribosomal protein L20